PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN03619.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 320aa    MW: 35990.9 Da    PI: 4.6307
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN03619.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.96.7e-12161204654
                 HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
         HLH   6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                  ++ErrRR+r+N++++ Lr+++Pk +      K++  +iL  +++Y+k+L
  KHN03619.1 161 LMAERRRRKRLNDRLSMLRSIVPKiS------KMDRTSILGDTIDYMKEL 204
                 589*********************66......****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.491155204IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.53E-15158220IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.2E-12161210IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.2E-9161204IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000839.86E-5162208No hitNo description
Gene3DG3DSA:4.10.280.106.5E-15162216IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    Send to blast
MELSQLGFLE ELVAPRRDSW NALSTGFCEL LSNGCCWSFD TFLENPTFGA FSAPRFESPY  60
SSEVSAAYPF AADGFTMPLP ELDPGSDEPP PPPPLPPSLE DAEIGFHDNN NKKKNNFEET  120
KVVCKVEEKD REIPLFKIGM CDDGERKPKS KKLEGQPSKN LMAERRRRKR LNDRLSMLRS  180
IVPKISKMDR TSILGDTIDY MKELLERIGK LQEEEGTSQI NLLGISREQL KPNEAIFDVE  240
RRDQDTRISI CCATKPGLLL STVNTLEAIG LEIQQCVVSS FNDFSVEASC SEVAEQRDCI  300
HPEEIKQALF RNAGFGEKCL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1163170ERRRRKRL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT0311120.0KT031112.1 Glycine max clone HN_CCL_214 bHLH transcription factor (Glyma08g37240.1) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003531971.10.0PREDICTED: transcription factor bHLH93-like
SwissprotQ9LSL13e-77BH093_ARATH; Transcription factor bHLH93
TrEMBLA0A0B2P7Q70.0A0A0B2P7Q7_GLYSO; Transcription factor bHLH93
STRINGGLYMA08G37240.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF118634103
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65640.13e-78beta HLH protein 93
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]